Section 4 Mining - Browse

The by-context browse interfaces facilitate the retrieval of regulatory interactions by navigating through different contexts. This illustration showcases an exemplar using the context `C0001: A549_Roadmap (PMID33828297)`. The red hexagons with integers represent sequential clicks for navigation. `Top`: The browse page displays a list of contexts for regulatory interactions, including the `Activity-By-Contact (ABC)` modality. `Bottom-left`: The context-specific page for `C0001: A549_Roadmap (PMID33828297)` provides a comprehensive list of regulatory interactions between genomic regions and genes. Each gene is hyperlinked to its gene-specific page for further exploration. `Bottom-right`: The gene-specific page for the gene `ROCK1P1` presents its regulatory interactions separately for different modalities (`ABC`, `PCHiC`, and `QTL`). Each context is hyperlinked to its corresponding context-specific page.

FIGURE 4.1: The by-context browse interfaces facilitate the retrieval of regulatory interactions by navigating through different contexts. This illustration showcases an exemplar using the context C0001: A549_Roadmap (PMID33828297). The red hexagons with integers represent sequential clicks for navigation. Top: The browse page displays a list of contexts for regulatory interactions, including the Activity-By-Contact (ABC) modality. Bottom-left: The context-specific page for C0001: A549_Roadmap (PMID33828297) provides a comprehensive list of regulatory interactions between genomic regions and genes. Each gene is hyperlinked to its gene-specific page for further exploration. Bottom-right: The gene-specific page for the gene ROCK1P1 presents its regulatory interactions separately for different modalities (ABC, PCHiC, and QTL). Each context is hyperlinked to its corresponding context-specific page.