Input Information

A runtime of 43 seconds (Mon Nov 25 22:39:30 2024 - Mon Nov 25 22:40:13 2024), time zone (Asia/Shanghai).

Interactive table for user-input genomic regions (n=381 analysed). The table includes three columns: 1st column Input for input genomic regions in the format of chr:start-end (the genome build hg19), 2nd Chr for the chromosome, 3rd Start for the start coordinate, 4th End for the end coordinate, and 5th Length for the region length (bp).

Output: Regulatory Genes

This tab features two output tables: Regulatory Gene table and Evidence table.

Regulatory Gene table contains information on regulatory genes (n=1186, identified from input genomic regions), including the column GScores (ranged from 1 to 10) that quantifies the degree to which genes are likely regulated by input genomic regions. Regulatory genes are sorted by their gene scores and are hyperlinked to gene-specific information page. Please refer to Evidence table for details on context-specific evidence.

Evidence table displays information about the genomic regions (listed under the column GR) that overlap the input genomic regions (listed under the column Input). The overlapped regions are used to define regulatory genes (listed under the column Regulatory genes) based on the evidence provided (see the column Evidence). The column Context indicates the contexts: the prefix ABC_ for contexts under the modality ABC (Activity-By-Contact), the prefix PCHiC_ for contexts under the modality PCHIC (Promoter Capture Hi-C), and the prefix QTL_ for contexts under the modality QTL (Quantitative Trait Locus).